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Published: 26 March 2026
Figure 3 The figure illustrates the conservation analysis of PTM sites in ABCC4. (A) The ABCC4 is reported with a total of five PTMs, and the user can select any of them for conservation analysis. The selection of ubiquitination lists the number of reported ubiquitinated sites across the protein isoforms of
Journal Article
Sreelakshmi Pathappillil Soman and others
Database, Volume 2026, 2026, baag015, https://doi.org/10.1093/database/baag015
Published: 26 March 2026
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Published: 26 March 2026
Figure 1 The schematic illustrates the methods and resources used for the development of IsoProDB. Schematic representation of the workflow, methods, and data sources involved in the development of IsoProDB.
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Published: 26 March 2026
Figure 2 The figure illustrates the isoform-specific exploration of ABCC4. The search bar navigates to the summary page, where (A) the transcript table lists all the transcripts and isoforms of ABCC4 along with the protein information. (B) Topology section shows the number of TMRs in all protein isoforms alo
Journal Article
Virudhagiri Elamurugan and others
Database, Volume 2026, 2026, baag014, https://doi.org/10.1093/database/baag014
Published: 24 March 2026
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Published: 24 March 2026
Figure 3 The count of P. aeruginosa genomes from geographic group shows that Asia (1561) and Europe (498) report the largest number of isolates, followed by North America (225), South America (57), and Oceania [ 1 ]. For image description, please refer to the figure legend and surrounding text.
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Published: 24 March 2026
Figure 1 Overview of the variant analysis and database implementation workflow for P. aeruginosa . For image description, please refer to the figure legend and surrounding text.
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Published: 24 March 2026
Figure 2 Year-wise counts of P. aeruginosa genomes retrieved from BV-BRC (Bacterial and Viral Bioinformatics Resource Center). For image description, please refer to the figure legend and surrounding text.
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Published: 24 March 2026
Figure 4 The proportion of genomes resistant to the different antibiotics in the 2342 genomes of P. aeruginosa shows that meropenem constitutes the highest percentage of resistance cases (16.4%), followed by ceftazidime (12.5%), amikacin (10.0%), and levofloxacin, which represents 9.9%. For image descri
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Published: 24 March 2026
Figure 5 Pa VarDB is organized using a relational database schema, implemented in SQLite. For image description, please refer to the figure legend and surrounding text.
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Published: 24 March 2026
Figure 6 The search schema for the web-based interface of Pa VarDB (P. aeruginosa variant database) is organized into two primary categories: Region-based search and phenotype-based search. For image description, please refer to the figure legend and surrounding text.
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Published: 17 March 2026
Figure 1 Mean number of queries in data discovery experiments as function of the dataset size, with linear regression line. Experiments consisted of 100 runs of up to 100 random genomic variants for different dataset sizes, until the first data subject is removed from the results by the RIP algorithm.
Journal Article
Jorge S Oliveira and others
Database, Volume 2026, 2026, baag012, https://doi.org/10.1093/database/baag012
Published: 17 March 2026
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Published: 17 March 2026
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Published: 17 March 2026
Figure 2 Box-plot depicting the distribution of number of queries until occlusion of the target data subject by the RIP algorithm ( ) in 100 re-identification attacks.
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Published: 27 February 2026
Figure 1 Based on EFO/RDO, EFO/HPO, and EFO/VT mapping, RDO, HPO, and VT annotations are translated from the EFO annotation and assigned to the human SNP QTL GWAS1013451_H.
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Published: 27 February 2026
Figure 8 Representations the hydrogen bond analysis of MK-3207 and etoposide. Panel (a) represents the H-bond analysis of MK-3207 and panel (b) represents the H-bond analysis of etoposide.
Journal Article
Stanley J F Laulederkind and others
Database, Volume 2026, 2026, baag008, https://doi.org/10.1093/database/baag008
Published: 27 February 2026
Journal Article
Farhan Ullah and others
Database, Volume 2026, 2026, baag011, https://doi.org/10.1093/database/baag011
Published: 27 February 2026
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Published: 27 February 2026
Figure 2 Path from human QTL GWAS651163_Hpage to a list of rat strains (models for hypertension) and QTLs. (A) QTL search; (B) Human QTL report page with disease annotation and relevant genomic data; (C) ‘Genes in Region’ of the human QTL page, showing ACE, the gene in which the human QTL GWAS651163_Hresides