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MOKCa-3D data processing workflow. This figure shows the overall workflow c... Open Access
Published: 27 April 2026
Figure 1.
MOKCa-3D data processing workflow. This figure shows the overall workflow consisting of four major components. (A) Mutations data processing—collection, filtering, normalization, and mapping of cancer associated mutations from TCGA and UniProt, (B) structural impact analysis—mapping mutations onto 3
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MOKCa-3D web interface. This figure shows user interface for gene-based que... Open Access
Published: 27 April 2026
Figure 3.
MOKCa-3D web interface. This figure shows user interface for gene-based queries to explore cancer-associated mutations or browse set of genes (Oncogene, Tumour-Suppressor, Protein-kinase, Drug-Target genes, DNA damage response proteins). For image description, please refer to the figure legend an
Journal Article
MOKCa-3D database: functional and structural analysis of missense mutations in cancer Open Access
Database, Volume 2026, 2026, baag001, https://doi.org/10.1093/database/baag001
Published: 27 April 2026
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MOKCa-3D overall architectural design. This figure shows the overview of th... Open Access
Published: 27 April 2026
Figure 2.
MOKCa-3D overall architectural design. This figure shows the overview of the MOKCa-3D platform architecture, consisting of MySQL relational database for mutation and annotation data, a Django backend for data processing and API endpoints to deliver data, and ReactJS front-end for interactive visuali
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Searching MOKCa-3D. This figure shows an example of use, analysing mutation... Open Access
Published: 27 April 2026
Figure 4.
Searching MOKCa-3D. This figure shows an example of use, analysing mutations in KRAS. (A) Gene search page—users begin by querying a gene of interest. (B) Gene-level view (example: KRAS)—displays functional annotations (GO terms) and a filterable mutation list. (C) Mutation-level view (example: G12V
Journal Article
Desert Plant Endophyte Genome Database: a curated repository of endophytic bacterial genomes across arid ecosystems Open Access
Database, Volume 2026, 2026, baag020, https://doi.org/10.1093/database/baag020
Published: 16 April 2026
Journal Article
TCMToxDB: a comprehensive database for the toxicological analysis of traditional Chinese medicines Open Access
Database, Volume 2026, 2026, baag019, https://doi.org/10.1093/database/baag019
Published: 16 April 2026
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Overview of the Desert Plant Endophyte Genome Database architecture. The da... Open Access
Published: 16 April 2026
Figure 1
Overview of the Desert Plant Endophyte Genome Database architecture. The database is organized around genome-centric records, integrating assembly statistics, ecological metadata, functional annotations, and PGPT profiles. The main navigation includes a home page with summary views, a quick links pa
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(A) The target–target interaction network of toxic targets predicted by HGN... Open Access
in
TCMToxDB: a comprehensive database for the toxicological analysis of traditional Chinese medicines
Published: 16 April 2026
Figure 3
(A) The target–target interaction network of toxic targets predicted by HGNA-HTI. Node size and colour correspond to their respective degree values, with larger and deeper nodes representing higher degrees. (B) and (C) illustrate the top 20 enriched KEGG pathways and GO entries with smaller FDR valu
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Molecular docking results with the lowest binding energy between ingredient... Open Access
in
TCMToxDB: a comprehensive database for the toxicological analysis of traditional Chinese medicines
Published: 16 April 2026
Figure 4
Molecular docking results with the lowest binding energy between ingredient methyl eugenol and toxicity targets predicted by DrugBAN. (A) Predicted toxic targets (PLAU, PTGS2, and PHF14) of ingredient methyl eugenol by DrugBAN, (B) eugenol-PLAU, (C) methyl eugenol-PTGS2, and (D) methyl eugenol-PHF14
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Framework overview of TCMToxDB. (A) The basic data of TCMToxDB include basi... Open Access
in
TCMToxDB: a comprehensive database for the toxicological analysis of traditional Chinese medicines
Published: 16 April 2026
Figure 1
Framework overview of TCMToxDB. (A) The basic data of TCMToxDB include basic information of formula, herbs, ingredients, targets, formula–herb interactions, herb–ingredient interactions, herb–target interactions, and ingredient–target interactions, the data storage is powered by MySQL. (B) Data brow
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Usage of TCMToxDB. (A) Herbs can be searched via keywords such as Chinese P... Open Access
in
TCMToxDB: a comprehensive database for the toxicological analysis of traditional Chinese medicines
Published: 16 April 2026
Figure 2
Usage of TCMToxDB. (A) Herbs can be searched via keywords such as Chinese Pinyin, Chinese characters, and Latin names. (B) Browse herb information, and click on pie fan leaf to view different types of data. (C) The summary panel on the detail page shows descriptive information for the formula, herb,
Journal Article
Dataset of xenobiotics human renal clearance values Open Access
Database, Volume 2026, 2026, baag018, https://doi.org/10.1093/database/baag018
Published: 11 April 2026
Journal Article
VarStack2—an interactive web tool for somatic variant interpretation in cancer Open Access
Database, Volume 2026, 2026, baag016, https://doi.org/10.1093/database/baag016
Published: 11 April 2026
Journal Article
BDCD: a comprehensive Brain Disease Cell-cell communication Database Open Access
Database, Volume 2026, 2026, baag017, https://doi.org/10.1093/database/baag017
Published: 02 April 2026
Journal Article
MASH-GA: a manually curated cross-species transcriptomic database for metabolic-associated steatohepatitis Open Access
Database, Volume 2026, 2026, baag013, https://doi.org/10.1093/database/baag013
Published: 02 April 2026
Journal Article
IsoProDB: an integrated map of human protein isoforms for accelerated research Open Access
Database, Volume 2026, 2026, baag015, https://doi.org/10.1093/database/baag015
Published: 26 March 2026
Journal Article
PaVarDB: a database and web platform for missense variant analysis in Pseudomonas aeruginosa using an end-to-end BVbase pipeline Open Access
Database, Volume 2026, 2026, baag014, https://doi.org/10.1093/database/baag014
Published: 24 March 2026
Journal Article
The Portuguese Beacon: sharing genomic variant data safely Open Access
Database, Volume 2026, 2026, baag012, https://doi.org/10.1093/database/baag012
Published: 17 March 2026
Journal Article
Mapping of EFO terms from the GWAS catalog data to multiple ontologies at the Rat Genome Database Open Access
Database, Volume 2026, 2026, baag008, https://doi.org/10.1093/database/baag008
Published: 27 February 2026
