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(a) Examples of entities and their grounding against SNOMED CT, as well as ...
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Improving biomedical entity linking for complex entity mentions with LLM-based text simplification
Published: 26 July 2024
Figure 1.
(a) Examples of entities and their grounding against SNOMED CT, as well as (b) an overview of our EL pipeline as a flow chart- the components investigated in this work are highlighted.
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Impact of different confidence thresholds for entity simplification as the ...
in
Improving biomedical entity linking for complex entity mentions with LLM-based text simplification
Published: 26 July 2024
Figure 3.
Impact of different confidence thresholds for entity simplification as the proportion of affected mentions out of all mentions, and the resulting improvements in recall@1 and recall@64 over the baseline candidate generator with the original mention spans (all results on the training set); we only si
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Impact of entity simplification for mentions of increasing length (in token...
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Improving biomedical entity linking for complex entity mentions with LLM-based text simplification
Published: 26 July 2024
Figure 4.
Impact of entity simplification for mentions of increasing length (in tokens, x -axis) - all results refer to the candidate generation phase (without reranking) on the training set: (a) total number of mentions by token length as context for the following relative measures (b) impact on overall rec
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The data collection and construction procedure of CO-19 PDB Version 2.0 inv...
Published: 26 July 2024
Figure 1.
The data collection and construction procedure of CO-19 PDB Version 2.0 involved a meticulous and systematic process to ensure accuracy and reliability.
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The utilization of CO-19 PDB is facilitated through a user-friendly interfa...
Published: 26 July 2024
Figure 2.
The utilization of CO-19 PDB is facilitated through a user-friendly interface, complemented by detailed stepwise images to enhance the user experience, (a) the search functionality, users can navigate by clicking on the category name, as illustrated in the provided insight; (b) users have the option
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The complete statistics of CO-19 PDB 2.0, including (a) month-wise growth o...
Published: 26 July 2024
Figure 4.
The complete statistics of CO-19 PDB 2.0, including (a) month-wise growth of the COVID databases, (b) category-wise growth, and (c) the number and comparison of entries between the previous database and the updated version (CO-19 PDB 2.0).
Journal Article
Improving biomedical entity linking for complex entity mentions with LLM-based text simplification
Database, Volume 2024, 2024, baae067, https://doi.org/10.1093/database/baae067
Published: 26 July 2024
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A detailed overview of the country-wise statistics of COVID-19. (a) The sta...
Published: 26 July 2024
Figure 5.
A detailed overview of the country-wise statistics of COVID-19. (a) The statistics on the number of patients and new cases during the COVID-19 period and (b) The data on the number of deaths and the recovery rate.
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Detailed daily and auto statistic information on COVID. (a) Daily updates o...
Published: 26 July 2024
Figure 6.
Detailed daily and auto statistic information on COVID. (a) Daily updates on the rates of new recoveries and new cases among COVID-19 patients, (b) a comprehensive overview of the details regarding the death and recovery rates, and (c) a detailed breakdown of the country-wise distribution.
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The number of new cancer cases and mortality rates during the COVID-19 peri...
Published: 26 July 2024
Figure 7.
The number of new cancer cases and mortality rates during the COVID-19 period. (a and b) The number of new cancer cases among both males and females during the COVID period and (c and d) detailed insights into the mortality estimates among both males and females during the COVID-19 period.
Journal Article
CO-19 PDB 2.0: A Comprehensive COVID-19 Database with Global Auto-Alerts, Statistical Analysis, and Cancer Correlations
Database, Volume 2024, 2024, baae072, https://doi.org/10.1093/database/baae072
Published: 26 July 2024
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Few-shot prompt template for entity simplification: few-shot examples are u...
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Improving biomedical entity linking for complex entity mentions with LLM-based text simplification
Published: 26 July 2024
Figure 2.
Few-shot prompt template for entity simplification: few-shot examples are underlined and the actual input mention is highlighted in bold, inputs and outputs are denoted by triple backticks (```).
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A thorough overview of the detailed methods for utilizing CO-19 PDB. (a) Th...
Published: 26 July 2024
Figure 3.
A thorough overview of the detailed methods for utilizing CO-19 PDB. (a) The user guidance page is a separate section that provides comprehensive details on using the database, offering insights into navigating the platform, and accessing information effectively. (b) This page provides comprehensive
Journal Article
Data set of fraction unbound values in the in vitro incubations for metabolic studies for better prediction of human clearance
Database, Volume 2024, 2024, baae063, https://doi.org/10.1093/database/baae063
Published: 24 July 2024
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Histogram of molecular weights.
Published: 24 July 2024
Figure 2.
Histogram of molecular weights.
Journal Article
PANGEN: an online platform for the comparison and creation of diagnostic gene panels
Database, Volume 2024, 2024, baae065, https://doi.org/10.1093/database/baae065
Published: 23 July 2024
Journal Article
Aerial Wildlife Image Repository for animal monitoring with drones in the age of artificial intelligence
Database, Volume 2024, 2024, baae070, https://doi.org/10.1093/database/baae070
Published: 23 July 2024
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The online platform has several tabs the user select to perform various tas...
Published: 23 July 2024
Figure 2.
The online platform has several tabs the user select to perform various tasks. (A) Panel browser—search for specific gene panels of interest. (B) Panel comparison—compare a selected panel with other similar panels and generate a new panel based on user-defined combinations. (C) Panel combination—gen
