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        Section: Database update
    
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Journal Article
ENcyclopedia of TRAnscription Factors in Bacteria and Archaea genomes (ENTRAF) version 2.0 Open Access
Silvia Tenorio-Salgado and others
        
            Database, Volume 2025, 2025, baaf071, https://doi.org/10.1093/database/baaf071
        
    Published: 29 October 2025
    
Journal Article
GExplore 1.5: a comprehensive Caenorhabditis elegans database for the analysis of gene function with a new user-friendly web interface Open Access
Harald Hutter and others
        
            Database, Volume 2025, 2025, baaf044, https://doi.org/10.1093/database/baaf044
        
    Published: 24 September 2025
    
Journal Article
GenDiS3 database: census on the prevalence of protein domain superfamilies of known structure in the entire sequence database Open Access
Sarthak Joshi and others
        
            Database, Volume 2025, 2025, baaf035, https://doi.org/10.1093/database/baaf035
        
    Published: 09 May 2025
    
Journal Article
GeniePool 2.0: advancing variant analysis through CHM13-T2T, AlphaMissense, gnomAD V4 integration, and variant co-occurrence queries Open Access
Grisha Weintraub and others
        
            Database, Volume 2024, 2024, baae130, https://doi.org/10.1093/database/baae130
        
    Published: 27 December 2024
    
Journal Article
Peptipedia v2.0: a peptide sequence database and user-friendly web platform. A major update Open Access
Gabriel Cabas-Mora and others
        
            Database, Volume 2024, 2024, baae113, https://doi.org/10.1093/database/baae113
        
    Published: 08 November 2024
    
Journal Article
CO-19 PDB 2.0: A Comprehensive COVID-19 Database with Global Auto-Alerts, Statistical Analysis, and Cancer Correlations Open Access
Shahid Ullah and others
        
            Database, Volume 2024, 2024, baae072, https://doi.org/10.1093/database/baae072
        
    Published: 26 July 2024
    
Journal Article
FishTEDB 2.0: an update fish transposable element (TE) database with new functions to facilitate TE research Open Access
Feng Shao and others
        
            Database, Volume 2024, 2024, baae044, https://doi.org/10.1093/database/baae044
        
    Published: 03 June 2024
    
Journal Article
Improved insights into the SABIO-RK database via visualization Open Access
Dorotea Dudaš and others
        
            Database, Volume 2023, 2023, baad011, https://doi.org/10.1093/database/baad011
        
    Published: 31 March 2023
    
Journal Article
BRACS: A Dataset for BReAst Carcinoma Subtyping in H&E Histology Images Open Access
Nadia Brancati and others
        
            Database, Volume 2022, 2022, baac093, https://doi.org/10.1093/database/baac093
        
    Published: 17 October 2022
    
Journal Article
GrainGenes: a data-rich repository for small grains genetics and genomics Open Access
Eric Yao and others
        
            Database, Volume 2022, 2022, baac034, https://doi.org/10.1093/database/baac034
        
    Published: 25 May 2022
    
Journal Article
SynLethDB 2.0: a web-based knowledge graph database on synthetic lethality for novel anticancer drug discovery Open Access
Jie Wang and others
        
            Database, Volume 2022, 2022, baac030, https://doi.org/10.1093/database/baac030
        
    Published: 14 May 2022
    
Journal Article
TMC-SNPdb 2.0: an ethnic-specific database of Indian germline variants Open Access
Sanket Desai and others
        
            Database, Volume 2022, 2022, baac029, https://doi.org/10.1093/database/baac029
        
    Published: 11 May 2022
    
Journal Article
PASS2.7: a database containing structure-based sequence alignments and associated features of protein domain superfamilies from SCOPe Open Access
Teerna Bhattacharyya and others
        
            Database, Volume 2022, 2022, baac025, https://doi.org/10.1093/database/baac025
        
    Published: 12 April 2022
    
Journal Article
The Sickle Cell Disease Ontology: recent development and expansion of the universal sickle cell knowledge representation Open Access
Gaston K Mazandu and others
        
            Database, Volume 2022, 2022, baac014, https://doi.org/10.1093/database/baac014
        
    Published: 01 April 2022
    
Journal Article
Diseases 2.0: a weekly updated database of disease–gene associations from text mining and data integration Open Access
Dhouha Grissa and others
        
            Database, Volume 2022, 2022, baac019, https://doi.org/10.1093/database/baac019
        
    Published: 24 March 2022
    
Journal Article
Anti-CRISPRdb v2.2: an online repository of anti-CRISPR proteins including information on inhibitory mechanisms, activities and neighbors of curated anti-CRISPR proteins Open Access
Chuan Dong and others
        
            Database, Volume 2022, 2022, baac010, https://doi.org/10.1093/database/baac010
        
    Published: 04 March 2022
    
Journal Article
DSDBASE 2.0: updated version of DiSulphide dataBASE, a database on disulphide bonds in proteins Open Access
Neha V Kalmankar and others
        
            Database, Volume 2022, 2022, baac005, https://doi.org/10.1093/database/baac005
        
    Published: 01 March 2022
    
Journal Article
phytochemdb: a platform for virtual screening and computer-aided drug designing Open Access
Shafi Mahmud and others
        
            Database, Volume 2022, 2022, baac002, https://doi.org/10.1093/database/baac002
        
    Published: 28 January 2022
    
Journal Article
SITVITBovis—a publicly available database and mapping tool to get an improved overview of animal and human cases caused by Mycobacterium bovis Open Access
David Couvin and others
        
            Database, Volume 2022, 2022, baab081, https://doi.org/10.1093/database/baab081
        
    Published: 13 January 2022
    
Journal Article
The Progenetix oncogenomic resource in 2021 Open Access
Qingyao Huang and others
        
            Database, Volume 2021, 2021, baab043, https://doi.org/10.1093/database/baab043
        
    Published: 17 July 2021