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Journal Article

Improving biomedical entity linking for complex entity mentions with LLM-based text simplification

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Florian Borchert and others
Database, Volume 2024, 2024, baae067, https://doi.org/10.1093/database/baae067
Published: 26 July 2024
Journal Article

Data set of fraction unbound values in the in vitro incubations for metabolic studies for better prediction of human clearance

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Laura Krumpholz and others
Database, Volume 2024, 2024, baae063, https://doi.org/10.1093/database/baae063
Published: 24 July 2024
Journal Article

Transverse aortic constriction multi-omics analysis uncovers pathophysiological cardiac molecular mechanisms

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Enio Gjerga and others
Database, Volume 2024, 2024, baae060, https://doi.org/10.1093/database/baae060
Published: 20 July 2024
Journal Article

MIAMI-AD (Methylation in Aging and Methylation in AD): an integrative knowledgebase that facilitates explorations of DNA methylation across sex, aging, and Alzheimer’s disease

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David Lukacsovich and others
Database, Volume 2024, 2024, baae061, https://doi.org/10.1093/database/baae061
Published: 19 July 2024
Journal Article

PPCRKB: a risk factor knowledge base of postoperative pulmonary complications

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Jianchao Duan and others
Database, Volume 2024, 2024, baae054, https://doi.org/10.1093/database/baae054
Published: 19 July 2024
Journal Article

HOFE: an interactive forensic entomological database

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Mandie Liu and others
Database, Volume 2024, 2024, baae058, https://doi.org/10.1093/database/baae058
Published: 13 July 2024
Journal Article

Towards discovery: an end-to-end system for uncovering novel biomedical relations

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Tiago Almeida and others
Database, Volume 2024, 2024, baae057, https://doi.org/10.1093/database/baae057
Published: 11 July 2024
Journal Article

DrugRepoBank: a comprehensive database and discovery platform for accelerating drug repositioning

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Yixian Huang and others
Database, Volume 2024, 2024, baae051, https://doi.org/10.1093/database/baae051
Published: 11 July 2024
Journal Article

SpadaHC: a database to improve the classification of variants in hereditary cancer genes in the Spanish population

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José M Moreno-Cabrera and others
Database, Volume 2024, 2024, baae055, https://doi.org/10.1093/database/baae055
Published: 04 July 2024
Journal Article

MyxoPortal: a database of myxobacterial genomic features

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Rayapadi G Swetha and others
Database, Volume 2024, 2024, baae056, https://doi.org/10.1093/database/baae056
Published: 02 July 2024
Journal Article

ISTransbase: an online database for inhibitor and substrate of drug transporters

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Jinfu Peng and others
Database, Volume 2024, 2024, baae053, https://doi.org/10.1093/database/baae053
Published: 29 June 2024
Journal Article

EUKARYOME: the rRNA gene reference database for identification of all eukaryotes

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Leho Tedersoo and others
Database, Volume 2024, 2024, baae043, https://doi.org/10.1093/database/baae043
Published: 12 June 2024
Journal Article

The Immunopeptidomics Ontology (ImPO)

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Daniel Faria and others
Database, Volume 2024, 2024, baae014, https://doi.org/10.1093/database/baae014
Published: 10 June 2024
Journal Article

DRGKB: a knowledgebase of worldwide diagnosis-related groups’ practices for comparison, evaluation and knowledge-guided application

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Shumin Ren and others
Database, Volume 2024, 2024, baae046, https://doi.org/10.1093/database/baae046
Published: 06 June 2024
Journal Article

MechanoProDB: a web-based database for exploring the mechanical properties of proteins

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Ismahene Mesbah and others
Database, Volume 2024, 2024, baae047, https://doi.org/10.1093/database/baae047
Published: 05 June 2024
Journal Article

MechanoBase: a comprehensive database for the mechanics of tissues and cells

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Yanhong Xiong and others
Database, Volume 2024, 2024, baae040, https://doi.org/10.1093/database/baae040
Published: 28 May 2024
Journal Article

An interactive web application for exploring systemic lupus erythematosus blood transcriptomic diversity

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Eléonore Bettacchioli and others
Database, Volume 2024, 2024, baae045, https://doi.org/10.1093/database/baae045
Published: 28 May 2024
Journal Article

DUVEL: an active-learning annotated biomedical corpus for the recognition of oligogenic combinations

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Charlotte Nachtegael and others
Database, Volume 2024, 2024, baae039, https://doi.org/10.1093/database/baae039
Published: 28 May 2024
Journal Article

PDB NextGen Archive: centralizing access to integrated annotations and enriched structural information by the Worldwide Protein Data Bank

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Preeti Choudhary and others
Database, Volume 2024, 2024, baae041, https://doi.org/10.1093/database/baae041
Published: 27 May 2024
Journal Article

MSGD: a manually curated database of genomic, transcriptomic, proteomic and drug information for multiple sclerosis

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Tao Wu and others
Database, Volume 2024, 2024, baae037, https://doi.org/10.1093/database/baae037
Published: 24 May 2024