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Journal Article

An approach to making life sciences FAIR—FAIR-DS as a tool for Aspergillus fumigatus Open Access

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Sibbe Bakker and others
Database, Volume 2025, 2025, baaf082, https://doi.org/10.1093/database/baaf082
Published: 02 January 2026
Journal Article

CyExpDB: a web-based multi-species tissue-specific gene expression platform for functional genomics in Cyprinidae fish Open Access

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Princy Saini and others
Database, Volume 2025, 2025, baaf087, https://doi.org/10.1093/database/baaf087
Published: 31 December 2025
Journal Article

The Odonata of China: a data-driven, open-access resource for biodiversity research and conservation Open Access

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Shao-Yan Pu and others
Database, Volume 2025, 2025, baaf077, https://doi.org/10.1093/database/baaf077
Published: 23 December 2025
Journal Article

From library to landscape: integrative annotation workflows for compound libraries in drug repurposing Open Access

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Jeanette Reinshagen and others
Database, Volume 2025, 2025, baaf081, https://doi.org/10.1093/database/baaf081
Published: 09 December 2025
Journal Article

Automated annotation and validation of human respiratory virus sequences using VADR Open Access

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Jeffrey Furlong and others
Database, Volume 2025, 2025, baaf078, https://doi.org/10.1093/database/baaf078
Published: 26 November 2025
Journal Article

MoPSeq-DB: a user-friendly web application for genomic data management and analysis of marine mollusc pathogens Open Access

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Clémentine Battistel and others
Database, Volume 2025, 2025, baaf080, https://doi.org/10.1093/database/baaf080
Published: 26 November 2025
Journal Article

HCoVDB: a comprehensive database encompassing viral genomes, drug targets, and therapeutics of human coronaviruses Open Access

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Pan Zhang and others
Database, Volume 2025, 2025, baaf079, https://doi.org/10.1093/database/baaf079
Published: 26 November 2025
Journal Article

Enhancing statistical analysis of real world data Open Access

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Laha Ale and others
Database, Volume 2025, 2025, baaf073, https://doi.org/10.1093/database/baaf073
Published: 22 November 2025
Journal Article

CircAI: a comprehensive database of CircRNA associated with A-to-I RNA editing Open Access

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Yulan Wang and others
Database, Volume 2025, 2025, baaf075, https://doi.org/10.1093/database/baaf075
Published: 22 November 2025
Journal Article

PolED: a manually curated database of functional studies of POLE and POLD1 variants reported in humans Open Access

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Lev Tsarin and Polina V Shcherbakova
Database, Volume 2025, 2025, baaf076, https://doi.org/10.1093/database/baaf076
Published: 20 November 2025
Journal Article

InTxDB: interaction data between gram-negative bacteria secreted effectors and host proteins Open Access

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Yanyan Zhu and others
Database, Volume 2025, 2025, baaf070, https://doi.org/10.1093/database/baaf070
Published: 31 October 2025
Journal Article

CobVar—a comprehensive resource of vitamin B12-associated genomic variants Open Access

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Neha H Suresh and others
Database, Volume 2025, 2025, baaf049, https://doi.org/10.1093/database/baaf049
Published: 01 October 2025
Journal Article

Characterization and automated classification of sentences in the biomedical literature: a case study for biocuration of gene expression and protein kinase activity Open Access

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Daniela Raciti and others
Database, Volume 2025, 2025, baaf063, https://doi.org/10.1093/database/baaf063
Published: 30 September 2025
Journal Article

VineColD: an integrative database for global historical tracing and real-time monitoring of grapevine cold hardiness Open Access

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Hongrui Wang and Jason P Londo
Database, Volume 2025, 2025, baaf055, https://doi.org/10.1093/database/baaf055
Published: 27 September 2025
Journal Article

The Microbe Directory: a centralized database for biological interpretation of microbiome data Open Access

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Maria A Sierra and others
Database, Volume 2025, 2025, baaf060, https://doi.org/10.1093/database/baaf060
Published: 24 September 2025
Journal Article

Automatic genetic phenotype normalization from dysmorphology physical examinations: an overview of the BioCreative VIII—Task 3 competition Open Access

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Davy Weissenbacher and others
Database, Volume 2025, 2025, baaf051, https://doi.org/10.1093/database/baaf051
Published: 24 September 2025
Journal Article

The impact of curation errors in the PDBBind Database on machine learning predictions of protein–protein binding affinity Open Access

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Jason D Gans and others
Database, Volume 2025, 2025, baaf061, https://doi.org/10.1093/database/baaf061
Published: 24 September 2025
Journal Article

p53motifDB: integration of genomic information and tumour suppressor p53 binding motifs Open Access

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Gabriele Baniulyte and others
Database, Volume 2025, 2025, baaf053, https://doi.org/10.1093/database/baaf053
Published: 24 September 2025
Journal Article

Biomedical literature-based clinical phenotype definition discovery using large language models Open Access

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Samar Binkheder and others
Database, Volume 2025, 2025, baaf047, https://doi.org/10.1093/database/baaf047
Published: 24 September 2025
Journal Article

ScLineageAtlas: a comprehensive single-cell genomics database for characterizing cellular clones in cancer Open Access

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Jinyang Liu and others
Database, Volume 2025, 2025, baaf046, https://doi.org/10.1093/database/baaf046
Published: 24 September 2025