Skip to Main Content
Journals
Books
Search
Close
Search
Advanced Search
Search Menu

Browse issues

Browse by volume
Issue Cover
Volume 2023
2023
(In Progress)
Cover image

Cover image

issue cover
EISSN 1758-0463
Issue navigation

Volume 2023, 2023

Chemical identification and indexing in full-text articles: an overview of the NLM-Chem track at BioCreative VII
Robert Leaman and others
Database, Volume 2023, 2023, baad005, https://doi.org/10.1093/database/baad005
FungiProteomeDB: a database for the molecular weight and isoelectric points of the fungal proteomes
Muhammad Rashid and others
Database, Volume 2023, 2023, baad004, https://doi.org/10.1093/database/baad004
Assessing the use of supplementary materials to improve genomic variant discovery
Emilie Pasche and others
Database, Volume 2023, 2023, baad017, https://doi.org/10.1093/database/baad017
Improved insights into the SABIO-RK database via visualization
Dorotea Dudaš and others
Database, Volume 2023, 2023, baad011, https://doi.org/10.1093/database/baad011
PurificationDB: database of purification conditions for proteins
Olivia Garland and others
Database, Volume 2023, 2023, baad016, https://doi.org/10.1093/database/baad016
PDC: a highly compact file format to store protein 3D coordinates
Chengxin Zhang and Anna Marie Pyle
Database, Volume 2023, 2023, baad018, https://doi.org/10.1093/database/baad018
The landscape of health disparities in the UK Biobank
Shashwat Deepali Nagar and others
Database, Volume 2023, 2023, baad026, https://doi.org/10.1093/database/baad026
Semi-automatic translation of medicine usage data (in Dutch, free-text) from Lifelines COVID-19 questionnaires to ATC codes
Alexander J Kellmann and others
Database, Volume 2023, 2023, baad019, https://doi.org/10.1093/database/baad019
Integrated ACMG-approved genes and ICD codes for the translational research and precision medicine
Raghunandan Wable and others
Database, Volume 2023, 2023, baad033, https://doi.org/10.1093/database/baad033
scBrainMap: a landscape for cell types and associated genetic markers in the brain
Yuhao Chi and others
Database, Volume 2023, 2023, baad035, https://doi.org/10.1093/database/baad035
CenhANCER: a comprehensive cancer enhancer database for primary tissues and cell lines
Zhi-Hui Luo and others
Database, Volume 2023, 2023, baad022, https://doi.org/10.1093/database/baad022
Developing TeroENZ and TeroMAP modules for the terpenome research platform TeroKit
Nianhang Chen and others
Database, Volume 2023, 2023, baad020, https://doi.org/10.1093/database/baad020
ChagasDB: 80 years of publicly available data on the molecular host response to Trypanosoma cruzi infection in a single database
Pauline Brochet and others
Database, Volume 2023, 2023, baad037, https://doi.org/10.1093/database/baad037
CIGAF—a database and interactive platform for insect-associated trichomycete fungi
Shalini Chaudhary and others
Database, Volume 2023, 2023, baad038, https://doi.org/10.1093/database/baad038
RNA-Chrom: a manually curated analytical database of RNA–chromatin interactome
G K Ryabykh and others
Database, Volume 2023, 2023, baad025, https://doi.org/10.1093/database/baad025
BLAB2CancerKD: a knowledge graph database focusing on the association between lactic acid bacteria and cancer, but beyond
Yi Jing and others
Database, Volume 2023, 2023, baad036, https://doi.org/10.1093/database/baad036

Original Articles

Developing a disease-specific annotation protocol for VHL gene curation using Hypothes.is
Dena Salehipour and others
Database, Volume 2023, 2023, baac109, https://doi.org/10.1093/database/baac109
ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations
Ming Hao and others
Database, Volume 2023, 2023, baac113, https://doi.org/10.1093/database/baac113
Automatic Extraction of Medication Mentions from Tweets—Overview of the BioCreative VII Shared Task 3 Competition
Davy Weissenbacher and others
Database, Volume 2023, 2023, baac108, https://doi.org/10.1093/database/baac108
SalivaDB—a comprehensive database for salivary biomarkers in humans
Akanksha Arora and others
Database, Volume 2023, 2023, baad002, https://doi.org/10.1093/database/baad002
Coronavirus Immunotherapeutic Consortium Database
Jarjapu Mahita and others
Database, Volume 2023, 2023, baac112, https://doi.org/10.1093/database/baac112
Standardized naming of microbiome samples in Genomes OnLine Database
Supratim Mukherjee and others
Database, Volume 2023, 2023, baad001, https://doi.org/10.1093/database/baad001
Assessing resource use: a case study with the Human Disease Ontology
J. Allen Baron and Lynn M Schriml
Database, Volume 2023, 2023, baad007, https://doi.org/10.1093/database/baad007
AIMedGraph: a comprehensive multi-relational knowledge graph for precision medicine
Xueping Quan and others
Database, Volume 2023, 2023, baad006, https://doi.org/10.1093/database/baad006
lncHUB2: aggregated and inferred knowledge about human and mouse lncRNAs
Giacomo B Marino and others
Database, Volume 2023, 2023, baad009, https://doi.org/10.1093/database/baad009
dbAQP-SNP: a database of missense single-nucleotide polymorphisms in human aquaporins
Rachana Dande and Ramasubbu Sankararamakrishnan
Database, Volume 2023, 2023, baad012, https://doi.org/10.1093/database/baad012
AFTM: a database of transmembrane regions in the human proteome predicted by AlphaFold
Jimin Pei and Qian Cong
Database, Volume 2023, 2023, baad008, https://doi.org/10.1093/database/baad008
A review of the International Seabed Authority database DeepData from a biological perspective: challenges and opportunities in the UN Ocean Decade
M Rabone and others
Database, Volume 2023, 2023, baad013, https://doi.org/10.1093/database/baad013
NbThermo: a new thermostability database for nanobodies
Mario S Valdés-Tresanco and others
Database, Volume 2023, 2023, baad021, https://doi.org/10.1093/database/baad021
CARD*Shark: automated prioritization of literature curation for the Comprehensive Antibiotic Resistance Database
Arman Edalatmand and Andrew G McArthur
Database, Volume 2023, 2023, baad023, https://doi.org/10.1093/database/baad023
A combinatorial approach implementing new database structures to facilitate practical data curation management of QTL, association, correlation and heritability data on trait variants
Zhi-Liang Hu and others
Database, Volume 2023, 2023, baad024, https://doi.org/10.1093/database/baad024
MBS: a genome browser annotation track for high-confident microRNA binding sites in whole human transcriptome
Walter Arancio and others
Database, Volume 2023, 2023, baad015, https://doi.org/10.1093/database/baad015
OncoCardioDB: a public and curated database of molecular information in onco-cardiology/cardio-oncology
Angela L Riffo-Campos and others
Database, Volume 2023, 2023, baad029, https://doi.org/10.1093/database/baad029
TRSRD: a database for research on risky substances in tea using natural language processing and knowledge graph-based techniques
Yongmei Wang and others
Database, Volume 2023, 2023, baad031, https://doi.org/10.1093/database/baad031
CaviDB: a database of cavities and their features in the structural and conformational space of proteins
Ana Julia Velez Rueda and others
Database, Volume 2023, 2023, baad010, https://doi.org/10.1093/database/baad010
PYK-SubstitutionOME: an integrated database containing allosteric coupling, ligand affinity and mutational, structural, pathological, bioinformatic and computational information about pyruvate kinase isozymes
Liskin Swint-Kruse and others
Database, Volume 2023, 2023, baad030, https://doi.org/10.1093/database/baad030
SmartWoodID—an image collection of large end-grain surfaces to support wood identification systems
Ruben De Blaere and others
Database, Volume 2023, 2023, baad034, https://doi.org/10.1093/database/baad034
IHM-DB: a curated collection of metagenomics data from the Indian Himalayan Region, and automated pipeline for 16S rRNA amplicon-based analysis (AutoQii2)
Abhishek Khatri and others
Database, Volume 2023, 2023, baad039, https://doi.org/10.1093/database/baad039
PLBD: protein–ligand binding database of thermodynamic and kinetic intrinsic parameters
Darius Lingė and others
Database, Volume 2023, 2023, baad040, https://doi.org/10.1093/database/baad040

Review

New approaches in developing medicinal herbs databases
Zahra Fathifar and others
Database, Volume 2023, 2023, baac110, https://doi.org/10.1093/database/baac110
Review of databases for experimentally validated human microRNA–mRNA interactions
Dorian Kariuki and others
Database, Volume 2023, 2023, baad014, https://doi.org/10.1093/database/baad014

Technical report

WASP: the World Archives of Species Perception
Tuan Nguyen and others
Database, Volume 2023, 2023, baad003, https://doi.org/10.1093/database/baad003

Correction

Correction to: Standardized naming of microbiome samples in Genomes OnLine Database
Database, Volume 2023, 2023, baad032, https://doi.org/10.1093/database/baad032

Database tool

SyntenyViewer: a comparative genomics-driven translational research tool
Raphael Flores and others
Database, Volume 2023, 2023, baad027, https://doi.org/10.1093/database/baad027
MantaID: a machine learning–based tool to automate the identification of biological database IDs
Zhengpeng Zeng and others
Database, Volume 2023, 2023, baad028, https://doi.org/10.1093/database/baad028
All issues
  • Online ISSN 1758-0463
  • Copyright © 2023 Oxford University Press

Oxford University Press is a department of the University of Oxford. It furthers the University's objective of excellence in research, scholarship, and education by publishing worldwide

Close
This Feature Is Available To Subscribers Only

Sign In or Create an Account

Close

This PDF is available to Subscribers Only

View Article Abstract & Purchase Options

For full access to this pdf, sign in to an existing account, or purchase an annual subscription.

Close