Collection
High-Impact Research from Database
-
Share
Explore a collection of the most read and most cited articles making an impact in Database published within the past two years. This collection will be continuously updated with the journal's leading articles so be sure to revisit periodically to see what is being read and cited.
Most cited
EUKARYOME: the rRNA gene reference database for identification of all eukaryotes
Leho Tedersoo and others
Database, Volume 2024, 2024, baae043, https://doi.org/10.1093/database/baae043
Molecular identification of micro- and macroorganisms based on nuclear markers has revolutionized our understanding of their taxonomy, phylogeny and ecology. Today, research on the diversity of eukaryotes in global ecosystems heavily relies on nuclear ribosomal RNA (rRNA) markers. Here, we present the research ...
nhanesA: achieving transparency and reproducibility in NHANES research
Laha Ale and others
Database, Volume 2024, 2024, baae028, https://doi.org/10.1093/database/baae028
The National Health and Nutrition Examination Survey provides comprehensive data on demographics, sociology, health and nutrition. Conducted in 2-year cycles since 1999, most of its data are publicly accessible, making it pivotal for research areas like studying social determinants of health or tracking trends in health ...
Integrating AI-powered text mining from PubTator into the manual curation workflow at the Comparative Toxicogenomics Database
Thomas C Wiegers and others
Database, Volume 2025, 2025, baaf013, https://doi.org/10.1093/database/baaf013
The Comparative Toxicogenomics Database (CTD) is a manually curated knowledge- and discovery-base that seeks to advance understanding about the relationship between environmental exposures and human health. CTD’s manual curation process extracts from the biomedical literature molecular relationships between ...
DisGeNet: a disease-centric interaction database among diseases and various associated genes
Yaxuan Hu and others
Database, Volume 2025, 2025, baae122, https://doi.org/10.1093/database/baae122
The pathogenesis of complex diseases is intricately linked to various genes and network medicine has enhanced understanding of diseases. However, most network-based approaches ignore interactions mediated by noncoding RNAs (ncRNAs) and most databases only focus on the association between genes and diseases. Based on the ...
DrugRepoBank: a comprehensive database and discovery platform for accelerating drug repositioning
Yixian Huang and others
Database, Volume 2024, 2024, baae051, https://doi.org/10.1093/database/baae051
In recent years, drug repositioning has emerged as a promising alternative to the time-consuming, expensive and risky process of developing new drugs for diseases. However, the current database for drug repositioning faces several issues, including insufficient data volume, restricted data types, algorithm inaccuracies ...
Peptipedia v2.0: a peptide sequence database and user-friendly web platform. A major update
Gabriel Cabas-Mora and others
Database, Volume 2024, 2024, baae113, https://doi.org/10.1093/database/baae113
In recent years, peptides have gained significant relevance due to their therapeutic properties. The surge in peptide production and synthesis has generated vast amounts of data, enabling the creation of comprehensive databases and information repositories. Advances in sequencing techniques and artificial intelligence have ...
PDB NextGen Archive: centralizing access to integrated annotations and enriched structural information by the Worldwide Protein Data Bank
Preeti Choudhary and others
Database, Volume 2024, 2024, baae041, https://doi.org/10.1093/database/baae041
The Protein Data Bank (PDB) is the global repository for public-domain experimentally determined 3D biomolecular structural information. The archival nature of the PDB presents certain challenges pertaining to updating or adding associated annotations from trusted external biodata resources. While each Worldwide PDB ...
ESKtides: a comprehensive database and mining method for ESKAPE phage-derived antimicrobial peptides
Hongfang Wu and others
Database, Volume 2024, 2024, baae022, https://doi.org/10.1093/database/baae022
‘Superbugs’ have received increasing attention from researchers, such as ESKAPE bacteria (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa and Enterobacter spp.), which directly led to about 1 270 000 death cases in 2019. Recently, phage peptidoglycan ...
AagingBase: a comprehensive database of anti-aging peptides
Kunjulakshmi R and others
Database, Volume 2024, 2024, baae016, https://doi.org/10.1093/database/baae016
The process of aging is an intrinsic and inevitable aspect of life that impacts every living organism. As biotechnological advancements continue to shape our understanding of medicine, peptide therapeutics have emerged as a promising strategy for anti-aging interventions. This is primarily due to their favorable ...
LettuceDB: an integrated multi-omics database for cultivated lettuce
Wenhui Zhou and others
Database, Volume 2024, 2024, baae018, https://doi.org/10.1093/database/baae018
Crop genomics has advanced rapidly during the past decade, which generated a great abundance of omics data from multi-omics studies. How to utilize the accumulating data becomes a critical and urgent demand in crop science. As an attempt to integrate multi-omics data, we developed a database, LettuceDB ...
Most read
No matches found for configured query.
Advertisement
Advertisement
Delve into the Women in Science collection
Recognizing and Celebrating Women in Science
Oxford University Press is proud to support diverse voices across our publishing. In this collection, we shine a spotlight on the representation of women in scientific fields, the gains that have been made in their fields, from research and major discoveries to advocacy and outreach, and amplify the voices of women who have made a career in scientific research.
Delve into the Women in Science collection