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Journal Article

FungiProteomeDB: a database for the molecular weight and isoelectric points of the fungal proteomes

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Muhammad Rashid, Muhammad Omar, Tapan Kumar Mohanta
Database, Volume 2023, 2023, baad004, https://doi.org/10.1093/database/baad004
Published: 16 March 2023
Journal Article

AFTM: a database of transmembrane regions in the human proteome predicted by AlphaFold

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Jimin Pei, Qian Cong
Database, Volume 2023, 2023, baad008, https://doi.org/10.1093/database/baad008
Published: 14 March 2023
Journal Article

dbAQP-SNP: a database of missense single-nucleotide polymorphisms in human aquaporins

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Rachana Dande, Ramasubbu Sankararamakrishnan
Database, Volume 2023, 2023, baad012, https://doi.org/10.1093/database/baad012
Published: 13 March 2023
Journal Article

Chemical identification and indexing in full-text articles: an overview of the NLM-Chem track at BioCreative VII

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Robert Leaman, Rezarta Islamaj, Virginia Adams, Mohammed A Alliheedi, João Rafael Almeida ...
Database, Volume 2023, 2023, baad005, https://doi.org/10.1093/database/baad005
Published: 07 March 2023
Journal Article

lncHUB2: aggregated and inferred knowledge about human and mouse lncRNAs

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Giacomo B Marino, Megan L Wojciechowicz, Daniel J B Clarke, Maxim V Kuleshov, Zhuorui Xie ...
Database, Volume 2023, 2023, baad009, https://doi.org/10.1093/database/baad009
Published: 04 March 2023
Journal Article

Assessing resource use: a case study with the Human Disease Ontology

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J. Allen Baron, Lynn M Schriml
Database, Volume 2023, 2023, baad007, https://doi.org/10.1093/database/baad007
Published: 28 February 2023
Journal Article

AIMedGraph: a comprehensive multi-relational knowledge graph for precision medicine

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Xueping Quan, Weijing Cai, Chenghang Xi, Chunxiao Wang, Linghua Yan
Database, Volume 2023, 2023, baad006, https://doi.org/10.1093/database/baad006
Published: 28 February 2023
Journal Article

Standardized naming of microbiome samples in Genomes OnLine Database

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Supratim Mukherjee, Galina Ovchinnikova, Dimitri Stamatis, Cindy Tianqing Li, I-Min A Chen ...
Database, Volume 2023, 2023, baad001, https://doi.org/10.1093/database/baad001
Published: 16 February 2023
Journal Article

Coronavirus Immunotherapeutic Consortium Database

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Jarjapu Mahita, Brendan Ha, Anais Gambiez, Sharon L Schendel, Haoyang Li ...
Database, Volume 2023, 2023, baac112, https://doi.org/10.1093/database/baac112
Published: 10 February 2023
Journal Article

SalivaDB—a comprehensive database for salivary biomarkers in humans

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Akanksha Arora, Dashleen Kaur, Sumeet Patiyal, Dilraj Kaur, Ritu Tomer ...
Database, Volume 2023, 2023, baad002, https://doi.org/10.1093/database/baad002
Published: 07 February 2023
Journal Article

Automatic Extraction of Medication Mentions from Tweets—Overview of the BioCreative VII Shared Task 3 Competition

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Davy Weissenbacher, Karen O’Connor, Siddharth Rawal, Yu Zhang, Richard Tzong-Han Tsai ...
Database, Volume 2023, 2023, baac108, https://doi.org/10.1093/database/baac108
Published: 03 February 2023
Journal Article

ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations

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Ming Hao, Yue Qi, Rongji Xu, Kangqi Zhao, Mingqing Li ...
Database, Volume 2023, 2023, baac113, https://doi.org/10.1093/database/baac113
Published: 19 January 2023
Journal Article

Developing a disease-specific annotation protocol for VHL gene curation using Hypothes.is

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Dena Salehipour, Kirsten M Farncombe, Veronica Andric, Safa Ansar, Sean Delong ...
Database, Volume 2023, 2023, baac109, https://doi.org/10.1093/database/baac109
Published: 06 January 2023
Journal Article

CafeteriaSA corpus: scientific abstracts annotated across different food semantic resources

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Gjorgjina Cenikj, Eva Valenčič, Gordana Ispirova, Matevž Ogrinc, Riste Stojanov ...
Database, Volume 2022, 2022, baac107, https://doi.org/10.1093/database/baac107
Published: 16 December 2022
Journal Article

Emati: a recommender system for biomedical literature based on supervised learning

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Özge Kart, Alexandre Mestiashvili, Kurt Lachmann, Richard Kwasnicki, Michael Schroeder
Database, Volume 2022, 2022, baac104, https://doi.org/10.1093/database/baac104
Published: 09 December 2022
Journal Article

NLM-Chem-BC7: manually annotated full-text resources for chemical entity annotation and indexing in biomedical articles

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Rezarta Islamaj, Robert Leaman, David Cissel, Cathleen Coss, Joseph Denicola ...
Database, Volume 2022, 2022, baac102, https://doi.org/10.1093/database/baac102
Published: 01 December 2022
Journal Article

LitCovid ensemble learning for COVID-19 multi-label classification

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Jinghang Gu, Emmanuele Chersoni, Xing Wang, Chu-Ren Huang, Longhua Qian ...
Database, Volume 2022, 2022, baac103, https://doi.org/10.1093/database/baac103
Published: 25 November 2022
Journal Article

HCDT: an integrated highly confident drug–target resource

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Jiaqi Chen, Zhengxin Chen, Rufei Chen, Dehua Feng, Tianyi Li ...
Database, Volume 2022, 2022, baac101, https://doi.org/10.1093/database/baac101
Published: 24 November 2022
Journal Article

Acinetobase: the comprehensive database and repository of Acinetobacter strains

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Adam Valcek, James Collier, Alexander Botzki, Charles Van der Henst
Database, Volume 2022, 2022, baac099, https://doi.org/10.1093/database/baac099
Published: 22 November 2022
Journal Article

PlagueKD: a knowledge graph–based plague knowledge database

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Jin Li, Jing Gao, Baiyang Feng, Yi Jing
Database, Volume 2022, 2022, baac100, https://doi.org/10.1093/database/baac100
Published: 22 November 2022