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Data statistics for cell organelles. ‘Not reported’ sub-cellular location, ... Open Access
Published: 31 October 2025
Figure 4.
Data statistics for cell organelles. ‘Not reported’ sub-cellular location, termed here as a separate category is not shown.
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Distribution of enzyme classes in this database. Numbers of entries in each... Open Access
Published: 31 October 2025
Figure 7.
Distribution of enzyme classes in this database. Numbers of entries in each category are shown. The reactions catalysed by the respective enzyme classes are shown on the right-hand side.
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Database example output against the query—UniProt ID: ‘P00445’; returned in... Open Access
Published: 31 October 2025
Figure 11.
Database example output against the query—UniProt ID: ‘P00445’; returned in a tabular format (upper panel). Cytoscape-generated interactome image (lower panel).
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InTxDB database home page and statistics of datasets. Open Access
Published: 31 October 2025
Figure 2.
InTxDB database home page and statistics of datasets.
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LCDD interface—search results. Open Access
Published: 31 October 2025
Figure 4.
LCDD interface—search results.
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The statistics of using liposomal carriers for (A) therapeutic, (B) diagnos... Open Access
Published: 31 October 2025
Figure 7.
The statistics of using liposomal carriers for (A) therapeutic, (B) diagnostic, and (C) theranostic applications (NR denotes ‘not reported’).
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The statistics of the most frequently used cargoes based on their types, in... Open Access
Published: 31 October 2025
Figure 8.
The statistics of the most frequently used cargoes based on their types, including (A) chemical compounds, (B) lipid compounds, (C) nanoparticles, (D) nucleic acids, and (E) proteins and peptides.
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Flowchart of ROSBase curation. Open Access
Published: 31 October 2025
Figure 2.
Flowchart of ROSBase curation.
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Workflow (integrating backend and frontend) of ROSBase1.0 webserver. Open Access
Published: 31 October 2025
Figure 3.
Workflow (integrating backend and frontend) of ROSBase1.0 webserver.
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The taxonomic classification of the database. Numbers of entries in each ca... Open Access
Published: 31 October 2025
Figure 5.
The taxonomic classification of the database. Numbers of entries in each category are shown.
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(a) Disease categories per protein entry (UniProt ID). (b) Pie chart repres... Open Access
Published: 31 October 2025
Figure 9.
(a) Disease categories per protein entry (UniProt ID). (b) Pie chart representation of each disease category and corresponding UniProt IDs.
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Interactome around Tp53, (a) derived from the STRING network and (b) regula... Open Access
Published: 31 October 2025
Figure 10.
Interactome around Tp53, (a) derived from the STRING network and (b) regulatory pathways of Tp53; inhibition (—|) and interaction (→).
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The workflow of InTxDB. The construction of InTxDB involves three main stag... Open Access
Published: 31 October 2025
Figure 1.
The workflow of InTxDB. The construction of InTxDB involves three main stages: data collection, data processing, and web construction. Data collection integrates three components: TxSE-human PPIs from databases and literature, structural data from PDB and AlphaFold DB, and interaction networks deriv
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Two modules of InTxDB. (A) Browse module: Users can filter interaction data... Open Access
Published: 31 October 2025
Figure 3.
Two modules of InTxDB. (A) Browse module: Users can filter interaction data using options such as bacterial species, secretion system type, and protein length to quickly locate relevant information. (B) Detailed information page: Displays comprehensive details on selected interactions, including pro
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Species of InTxDB. InTxDB provides species-specific interaction networks, a... Open Access
Published: 31 October 2025
Figure 4.
Species of InTxDB. InTxDB provides species-specific interaction networks, allowing users to explore bacterial effector–host interactions across different bacterial species. Users can filter results by species, interaction detection method, and effector type, with options to toggle between ‘Interacti
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The data from liposome research articles were manually extracted and incorp... Open Access
Published: 31 October 2025
Figure 1.
The data from liposome research articles were manually extracted and incorporated into a comprehensive database (LCDD).
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LCDD interface—basic search. Open Access
Published: 31 October 2025
Figure 2.
LCDD interface—basic search.
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(A) The frequency of liposomal carriers used in various cancers, (B) the st... Open Access
Published: 31 October 2025
Figure 5.
(A) The frequency of liposomal carriers used in various cancers, (B) the statistics of the experiment type in cancer-related liposomal formulations, and (C) the frequency of various animal models used in the in vivo experiment on liposomes in cancer-related research (NR denotes ‘not reported’).
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(A) The statistics of the cargos loaded in liposomal carriers, (B) the size... Open Access
Published: 31 October 2025
Figure 6.
(A) The statistics of the cargos loaded in liposomal carriers, (B) the size distribution of the liposomal carriers in cancer research, and (C) statistics of therapeutic, diagnostic, and theranostic liposomal formulations (NR denotes ‘not reported’).
Journal Article
ROSBASE1.0: a comprehensive database of reactive oxygen species (ROS): categorization of cell organelles, proteins, taxonomy, and diseases based on ROS-related activities Open Access
Database, Volume 2025, 2025, baaf069, https://doi.org/10.1093/database/baaf069
Published: 31 October 2025
