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Authors: Ming Chen
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Journal Article

AthRiboNC: an Arabidopsis database for ncRNAs with coding potential revealed from ribosome profiling

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Yi Shen and others
Database, Volume 2024, 2024, baae123, https://doi.org/10.1093/database/baae123
Published: 17 December 2024
Journal Article

CropGF: a comprehensive visual platform for crop gene family mining and analysis

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Jingtian Xu and others
Database, Volume 2023, 2023, baad051, https://doi.org/10.1093/database/baad051
Published: 01 July 2023
Journal Article

LBD: a manually curated database of experimentally validated lymphoma biomarkers

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Bin Tan and others
Database, Volume 2022, 2022, baac051, https://doi.org/10.1093/database/baac051
Published: 29 June 2022
Journal Article

lncExplore: a database of pan-cancer analysis and systematic functional annotation for lncRNAs from RNA-sequencing data

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Yi-Wei Lee and others
Database, Volume 2021, 2021, baab053, https://doi.org/10.1093/database/baab053
Published: 31 August 2021
Journal Article

mPPI: a database extension to visualize structural interactome in a one-to-many manner

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Yekai Zhou and others
Database, Volume 2021, 2021, baab036, https://doi.org/10.1093/database/baab036
Published: 22 June 2021
Journal Article

Tripal and Galaxy: supporting reproducible scientific workflows for community biological databases

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Shawna Spoor and others
Database, Volume 2020, 2020, baaa032, https://doi.org/10.1093/database/baaa032
Published: 04 July 2020
Journal Article

PncStress: a manually curated database of experimentally validated stress-responsive non-coding RNAs in plants

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Wenyi Wu and others
Database, Volume 2020, 2020, baaa001, https://doi.org/10.1093/database/baaa001
Published: 17 March 2020
Journal Article

Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases

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Shawna Spoor and others
Database, Volume 2019, 2019, baz077, https://doi.org/10.1093/database/baz077
Published: 22 July 2019
Journal Article

SeQuery: an interactive graph database for visualizing the GPCR superfamily

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Geng-Ming Hu and others
Database, Volume 2019, 2019, baz073, https://doi.org/10.1093/database/baz073
Published: 25 June 2019
Journal Article

CircFunBase: a database for functional circular RNAs

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Xianwen Meng and others
Database, Volume 2019, 2019, baz003, https://doi.org/10.1093/database/baz003
Published: 04 February 2019
Journal Article

Tripal Developer Toolkit

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Bradford Condon and others
Database, Volume 2018, 2018, bay099, https://doi.org/10.1093/database/bay099
Published: 20 September 2018
Journal Article

PlantCircNet: a database for plant circRNA–miRNA–mRNA regulatory networks

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Peijing Zhang and others
Database, Volume 2017, 2017, bax089, https://doi.org/10.1093/database/bax089
Published: 09 December 2017
Journal Article

New extension software modules to enhance searching and display of transcriptome data in Tripal databases

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Ming Chen and others
Database, Volume 2017, 2017, bax052, https://doi.org/10.1093/database/bax052
Published: 27 July 2017
Journal Article

Overview of the gene ontology task at BioCreative IV

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Yuqing Mao and others
Database, Volume 2014, 2014, bau086, https://doi.org/10.1093/database/bau086
Published: 25 August 2014