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Volume 2022, 2022
Original Articles
MetaCOXI: an integrated collection of metazoan mitochondrial cytochrome oxidase subunit-I DNA sequences
Database, Volume 2022, 2022, baab084, https://doi.org/10.1093/database/baab084
PlantGF: an analysis and annotation platform for plant gene families
Database, Volume 2022, 2022, baab088, https://doi.org/10.1093/database/baab088
ImmuneData: an integrated data discovery system for immunology data repositories
Database, Volume 2022, 2022, baac003, https://doi.org/10.1093/database/baac003
GNIFdb: a neoantigen intrinsic feature database for glioma
Database, Volume 2022, 2022, baac004, https://doi.org/10.1093/database/baac004
PSINDB: the postsynaptic protein–protein interaction database
Database, Volume 2022, 2022, baac007, https://doi.org/10.1093/database/baac007
HPVMD-C: a disease-based mutation database of human papillomavirus in China
Database, Volume 2022, 2022, baac018, https://doi.org/10.1093/database/baac018
SwissBioPics—an interactive library of cell images for the visualization of subcellular location data
Database, Volume 2022, 2022, baac026, https://doi.org/10.1093/database/baac026
XePhIR: the zebrafish xenograft phenotype interactive repository
Database, Volume 2022, 2022, baac028, https://doi.org/10.1093/database/baac028
Translational drug–interaction corpus
Database, Volume 2022, 2022, baac031, https://doi.org/10.1093/database/baac031
A Simple Standard for Sharing Ontological Mappings (SSSOM)
Database, Volume 2022, 2022, baac035, https://doi.org/10.1093/database/baac035
AnthraxKP: a knowledge graph-based, Anthrax Knowledge Portal mined from biomedical literature
Database, Volume 2022, 2022, baac037, https://doi.org/10.1093/database/baac037
A transcriptome atlas and interactive analysis platform for autoimmune disease
Database, Volume 2022, 2022, baac050, https://doi.org/10.1093/database/baac050
GinkgoDB: an ecological genome database for the living fossil, Ginkgo biloba
Database, Volume 2022, 2022, baac046, https://doi.org/10.1093/database/baac046
dbBIP: a comprehensive bipolar disorder database for genetic research
Database, Volume 2022, 2022, baac049, https://doi.org/10.1093/database/baac049
HumanMine: advanced data searching, analysis and cross-species comparison
Database, Volume 2022, 2022, baac054, https://doi.org/10.1093/database/baac054
GeMo: a web-based platform for the visualization and curation of genome ancestry mosaics
Database, Volume 2022, 2022, baac057, https://doi.org/10.1093/database/baac057
MEDFORD: A human- and machine-readable metadata markup language
Database, Volume 2022, 2022, baac065, https://doi.org/10.1093/database/baac065
SC2sepsis: sepsis single-cell whole gene expression database
Database, Volume 2022, 2022, baac061, https://doi.org/10.1093/database/baac061
CPMCP: a database of Chinese patent medicine and compound prescription
Database, Volume 2022, 2022, baac073, https://doi.org/10.1093/database/baac073
EfGD: the Erianthus fulvus genome database
Database, Volume 2022, 2022, baac076, https://doi.org/10.1093/database/baac076
LiqBioer: a manually curated database of cancer biomarkers in body fluid
Database, Volume 2022, 2022, baac077, https://doi.org/10.1093/database/baac077
AGODB: a comprehensive domain annotation database of argonaute proteins
Database, Volume 2022, 2022, baac078, https://doi.org/10.1093/database/baac078
COTTONOMICS: a comprehensive cotton multi-omics database
Database, Volume 2022, 2022, baac080, https://doi.org/10.1093/database/baac080
DGPD: a knowledge database of dense granule proteins of the Apicomplexa
Database, Volume 2022, 2022, baac085, https://doi.org/10.1093/database/baac085
BCSCdb: a database of biomarkers of cancer stem cells
Database, Volume 2022, 2022, baac082, https://doi.org/10.1093/database/baac082
Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies
Database, Volume 2022, 2022, baac087, https://doi.org/10.1093/database/baac087
Assigning species information to corresponding genes by a sequence labeling framework
Database, Volume 2022, 2022, baac090, https://doi.org/10.1093/database/baac090
PharmaKoVariome database for supporting genetic testing
Database, Volume 2022, 2022, baac092, https://doi.org/10.1093/database/baac092
FDRdb: a manually curated database of fibrotic disease–associated RNAome and high-throughput datasets
Database, Volume 2022, 2022, baac095, https://doi.org/10.1093/database/baac095
Chemical–protein relation extraction with ensembles of carefully tuned pretrained language models
Database, Volume 2022, 2022, baac098, https://doi.org/10.1093/database/baac098
PlagueKD: a knowledge graph–based plague knowledge database
Database, Volume 2022, 2022, baac100, https://doi.org/10.1093/database/baac100
HCDT: an integrated highly confident drug–target resource
Database, Volume 2022, 2022, baac101, https://doi.org/10.1093/database/baac101
LitCovid ensemble learning for COVID-19 multi-label classification
Database, Volume 2022, 2022, baac103, https://doi.org/10.1093/database/baac103
Database update
phytochemdb: a platform for virtual screening and computer-aided drug designing
Database, Volume 2022, 2022, baac002, https://doi.org/10.1093/database/baac002
TMC-SNPdb 2.0: an ethnic-specific database of Indian germline variants
Database, Volume 2022, 2022, baac029, https://doi.org/10.1093/database/baac029
SynLethDB 2.0: a web-based knowledge graph database on synthetic lethality for novel anticancer drug discovery
Database, Volume 2022, 2022, baac030, https://doi.org/10.1093/database/baac030
GrainGenes: a data-rich repository for small grains genetics and genomics
Database, Volume 2022, 2022, baac034, https://doi.org/10.1093/database/baac034
BRACS: A Dataset for BReAst Carcinoma Subtyping in H&E Histology Images
Database, Volume 2022, 2022, baac093, https://doi.org/10.1093/database/baac093
Database tool
met v1: expanding on old estimations of biodiversity from eDNA with a new database framework
Database, Volume 2022, 2022, baac032, https://doi.org/10.1093/database/baac032
LBD: a manually curated database of experimentally validated lymphoma biomarkers
Database, Volume 2022, 2022, baac051, https://doi.org/10.1093/database/baac051
Multi-omics molecular biomarkers and database of osteoarthritis
Database, Volume 2022, 2022, baac052, https://doi.org/10.1093/database/baac052
ProbResist: a database for drug-resistant probiotic bacteria
Database, Volume 2022, 2022, baac064, https://doi.org/10.1093/database/baac064
CATA: a comprehensive chromatin accessibility database for cancer
Database, Volume 2022, 2022, baab085, https://doi.org/10.1093/database/baab085
TEx-MST: tissue expression profiles of MANE select transcripts
Database, Volume 2022, 2022, baac089, https://doi.org/10.1093/database/baac089
Review Articles
Meeting report
Conference report: Biocuration 2021 Virtual Conference
Database, Volume 2022, 2022, baac027, https://doi.org/10.1093/database/baac027
Perspective/Opinion
New reasons for biologists to write with a formal language
Database, Volume 2022, 2022, baac039, https://doi.org/10.1093/database/baac039
Challenges and opportunities for mining adverse drug reactions: perspectives from pharma, regulatory agencies, healthcare providers and consumers
Graciela Gonzalez-Hernandez, Martin Krallinger, Monica Muñoz, Raul Rodriguez-Esteban, Özlem Uzuner
...
Database, Volume 2022, 2022, baac071, https://doi.org/10.1093/database/baac071
Reviewing knowledgebase and database grant proposals in the life sciences: the role of innovation
Database, Volume 2022, 2022, baac106, https://doi.org/10.1093/database/baac106
Correction
Correction to: Acinetobase: the comprehensive database and repository of Acinetobacter strains
Database, Volume 2022, 2022, baac111, https://doi.org/10.1093/database/baac111
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